Starting a new assay or project
Whenever you obtain sequencing data from Genomic's Platform, you have to create an Assay. By running the commands below, you will have option to fill all required information about the experiment. This workflow will help us with tracking of all sequencing done in our lab.
Assay
When you sequence an experiment, we create an Assay out of it, so we can use it in a project afterwards.
Login to danhead and run command:
Project
Every time you want to make some analysis, you should create a project. Our folder structure will allow you to easily link various experiments to your project and make your analysis easier.
Please use the following naming convention: surname-<YOUR_CODENAME>
Link required assays to your project.
ln -s /maps/projects/dan1/data/Brickman/assays/<ASSAY_ID> /maps/projects/dan1/data/Brickman/projects/<PROJECT_ID>/data/assays/
Link external data if needed